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  5. Pp1s55_55V6

Pp1s55_55V6


Description : protein transport protein


Gene families : OG_42_0001214 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001214_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s55_55V6
Cluster HCCA clusters: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
At5g43670 No alias At5g43670 [Source:UniProtKB/TrEMBL;Acc:Q84WI4] 0.02 Orthogroups_2024-Update
Bradi3g38100 No alias Sec23/Sec24 protein transport family protein 0.03 Orthogroups_2024-Update
Bradi4g19570 No alias Sec23/Sec24 protein transport family protein 0.09 Orthogroups_2024-Update
Bradi4g32280 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Cre03.g180850 No alias Sec23/Sec24 protein transport family protein 0.04 Orthogroups_2024-Update
GRMZM2G045987 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Glyma.03G091800 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Glyma.11G253500 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Glyma.18G003500 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G014740.3 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex 0.05 Orthogroups_2024-Update
Kfl00039_0040 kfl00039_0040_v1.1 (at3g23660 : 799.0) Sec23/Sec24 protein transport family... 0.02 Orthogroups_2024-Update
Kfl00310_0160 kfl00310_0160_v1.1 (at3g23660 : 1005.0) Sec23/Sec24 protein transport... 0.01 Orthogroups_2024-Update
PSME_00001066-RA No alias (at3g23660 : 696.0) Sec23/Sec24 protein transport family... 0.03 Orthogroups_2024-Update
Seita.8G114200.1 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex 0.08 Orthogroups_2024-Update
Sobic.005G110499.1 No alias component *(Sec23) of Sec23/24 cargo adaptor subcomplex 0.03 Orthogroups_2024-Update
Solyc09g092680 No alias Protein transport protein sec23, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Sopen01g032690 No alias Sec23/Sec24 trunk domain 0.03 Orthogroups_2024-Update
Sopen05g032300 No alias Sec23/Sec24 trunk domain 0.04 Orthogroups_2024-Update
evm.model.contig_2239.2 No alias (at3g23660 : 697.0) Sec23/Sec24 protein transport family... 0.02 Orthogroups_2024-Update
evm.model.tig00001408.15 No alias (at3g23660 : 315.0) Sec23/Sec24 protein transport family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0030127 COPII vesicle coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005086 ARF guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005665 RNA polymerase II, core complex IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007010 cytoskeleton organization IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Predicted GO
BP GO:0015689 molybdate ion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032012 regulation of ARF protein signal transduction IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046578 regulation of Ras protein signal transduction IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1902531 regulation of intracellular signal transduction IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006900 Sec23/24_helical_dom 538 636
IPR006896 Sec23/24_trunk_dom 130 407
IPR006895 Znf_Sec23_Sec24 58 96
IPR012990 Sec23_24_beta_S 418 521
IPR007123 Gelsolin-like_dom 650 738
No external refs found!