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  5. Pp1s56_226V6

Pp1s56_226V6


Description : histone h2b


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s56_226V6
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
A4A49_29058 No alias histone h2b 0.02 Orthogroups_2024-Update
At3g46030 No alias Histone H2B [Source:UniProtKB/TrEMBL;Acc:A0A178VGU6] 0.03 Orthogroups_2024-Update
Cre06.g264900 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre06.g273850 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504550 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Cre12.g504700 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre12.g505600 No alias Histone superfamily protein 0.01 Orthogroups_2024-Update
Cre12.g506200 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre13.g570050 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Cre17.g708600 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G046841 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G071959 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G401147 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G472696 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Glyma.13G321600 No alias Histone superfamily protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G058440.4 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU1Hr1G085540.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU3Hr1G013530.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Sobic.003G200501.1 No alias histone *(H2B) 0.03 Orthogroups_2024-Update
Sopen06g031230 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen06g032230 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen11g003790 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen11g026180 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update
Sopen12g006850 No alias Core histone H2A/H2B/H3/H4 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA InterProScan predictions
MF GO:0003677 DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0008536 Ran GTPase binding IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 111
No external refs found!