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  5. Pp1s57_72V6

Pp1s57_72V6


Description : 60s ribosomal protein


Gene families : OG_42_0001465 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s57_72V6
Cluster HCCA clusters: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
A4A49_12213 No alias 60s ribosomal protein l34 0.04 Orthogroups_2024-Update
At1g26880 No alias 60S ribosomal protein L34-1... 0.03 Orthogroups_2024-Update
Bradi3g16600 No alias Ribosomal protein L34e superfamily protein 0.02 Orthogroups_2024-Update
Brara.B01869.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.G02472.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.G02897.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.H02161.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre16.g661050 No alias Ribosomal protein L34e superfamily protein 0.04 Orthogroups_2024-Update
Glyma.01G047000 No alias Ribosomal protein L34e superfamily protein 0.07 Orthogroups_2024-Update
Glyma.02G107100 No alias Ribosomal protein L34e superfamily protein 0.04 Orthogroups_2024-Update
Glyma.08G301300 No alias Ribosomal protein L34e superfamily protein 0.05 Orthogroups_2024-Update
HORVU2Hr1G080340.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU5Hr1G066000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
HORVU7Hr1G071240.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00598_0060 kfl00598_0060_v1.1 (p40590|rl34_pea : 144.0) 60S ribosomal protein L34 -... 0.07 Orthogroups_2024-Update
MA_175574g0010 No alias (p41098|rl34_tobac : 177.0) 60S ribosomal protein L34 -... 0.03 Orthogroups_2024-Update
Mp4g17040.1 No alias component RPL34 of LSU proteome component 0.04 Orthogroups_2024-Update
Potri.012G108400 No alias Ribosomal protein L34e superfamily protein 0.04 Orthogroups_2024-Update
Potri.015G106500 No alias Ribosomal protein L34e superfamily protein 0.04 Orthogroups_2024-Update
Potri.017G082200 No alias Ribosomal protein L34e superfamily protein 0.03 Orthogroups_2024-Update
Pp1s39_344V6 No alias 60s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s76_47V6 No alias 60s ribosomal protein l34 0.06 Orthogroups_2024-Update
Seita.2G204000.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.06 Orthogroups_2024-Update
Seita.6G057100.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Seita.7G124100.1 No alias component *(eL34) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Solyc05g007560 No alias 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) 0.05 Orthogroups_2024-Update
Solyc06g069860 No alias 60S ribosomal protein L34 (AHRD V3.3 *** RL34_TOBAC) 0.07 Orthogroups_2024-Update
Sopen05g003450 No alias Ribosomal protein L34e 0.05 Orthogroups_2024-Update
Sopen06g027130 No alias Ribosomal protein L34e 0.05 Orthogroups_2024-Update
evm.model.contig_445.6 No alias (p41098|rl34_tobac : 125.0) 60S ribosomal protein L34 -... 0.03 Orthogroups_2024-Update
evm.model.tig00000632.3 No alias (at1g26880 : 109.0) Ribosomal protein L34e superfamily... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005622 intracellular IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008195 Ribosomal_L34Ae 1 96
No external refs found!