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  5. Pp1s59_293V6

Pp1s59_293V6


Description : T22K7.20; sec23/sec24 transport family protein [Arabidopsis thaliana]


Gene families : OG_42_0001342 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s59_293V6
Cluster HCCA clusters: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Bradi5g01280 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
Glyma.19G226200 No alias Sec23/Sec24 protein transport family protein 0.02 Orthogroups_2024-Update
MA_10434705g0010 No alias (at3g07100 : 298.0) Encodes SEC24a/ERMO2. Required for... 0.02 Orthogroups_2024-Update
PSME_00010258-RA No alias (at3g07100 : 1033.0) Encodes SEC24a/ERMO2. Required for... 0.03 Orthogroups_2024-Update
PSME_00013998-RA No alias (at4g32640 : 1065.0) Sec23/Sec24 protein transport... 0.02 Orthogroups_2024-Update
Seita.3G302100.1 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex 0.03 Orthogroups_2024-Update
Seita.7G016400.1 No alias component *(Sec24) of Sec23/24 cargo adaptor subcomplex 0.03 Orthogroups_2024-Update
evm.model.tig00000829.3 No alias (at3g44340 : 410.0) homologous to yeast and animal Sec24... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan predictions
BP GO:0006888 ER to Golgi vesicle-mediated transport IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
CC GO:0030127 COPII vesicle coat IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007186 G protein-coupled receptor signaling pathway IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008237 metallopeptidase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0017144 drug metabolic process IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0043015 gamma-tubulin binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006895 Znf_Sec23_Sec24 498 538
IPR006900 Sec23/24_helical_dom 911 1007
IPR006896 Sec23/24_trunk_dom 575 810
IPR012990 Sec23_24_beta_S 816 899
No external refs found!