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Pp1s59_66V6


Description : ubiquitin ligase protein


Gene families : OG_42_0000717 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000717_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s59_66V6
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Cre13.g602700 No alias SPA1-related 2 0.03 Orthogroups_2024-Update
HORVU6Hr1G018380.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G079670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g53140 No alias COP1, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g49590 No alias suppressor of phythchrome A, putative, expressed 0.02 Orthogroups_2024-Update
evm.model.tig00000852.18 No alias (p93471|cop1_pea : 355.0) E3 ubiquitin ligase protein... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 727 759
IPR001680 WD40_repeat 639 675
No external refs found!