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  5. Solyc12g009780

Solyc12g009780


Description : LOW QUALITY:Leucine-rich-repeat receptor-like protein (AHRD V3.3 *** A0A0D4WVW2_GOSBA)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g009780
Cluster HCCA clusters: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
At1g47890 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.I04084.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.09G145600 No alias receptor like protein 7 0.04 Orthogroups_2024-Update
Glyma.14G043300 No alias receptor like protein 33 0.04 Orthogroups_2024-Update
LOC_Os01g06900 No alias verticillium wilt disease resistance protein Ve2,... 0.04 Orthogroups_2024-Update
LOC_Os01g06920 No alias resistance protein SlVe1 precursor, putative, expressed 0.04 Orthogroups_2024-Update
LOC_Os12g12130 No alias verticillium wilt disease resistance protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_8610131g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Potri.012G009566 No alias receptor like protein 34 0.03 Orthogroups_2024-Update
Potri.T085700 No alias receptor like protein 54 0.03 Orthogroups_2024-Update
Solyc01g008410 No alias LOW QUALITY:Leucine-rich repeat receptor-like protein... 0.04 Orthogroups_2024-Update
Solyc12g006020 No alias No description available 0.03 Orthogroups_2024-Update
Solyc12g009520 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g009740 No alias Leucine-rich repeat receptor-like protein kinase family... 0.05 Orthogroups_2024-Update
Solyc12g009770 No alias LOW QUALITY:Leucine-rich-repeat receptor-like protein... 0.03 Orthogroups_2024-Update
Sopen01g001750 No alias Leucine Rich Repeat 0.03 Orthogroups_2024-Update
Sopen01g001770 No alias Leucine Rich repeats (2 copies) 0.04 Orthogroups_2024-Update
Sopen12g004510 No alias NB-ARC domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 738 797
IPR001611 Leu-rich_rpt 1097 1154
IPR001611 Leu-rich_rpt 618 677
IPR001611 Leu-rich_rpt 808 869
IPR013210 LRR_N_plant-typ 346 391
IPR001611 Leu-rich_rpt 100 119
IPR001611 Leu-rich_rpt 594 616
No external refs found!