Pp1s61_123V6

Description : 60s ribosomal protein

Gene families : OG_42_0001366 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001366_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s61_123V6
Cluster	HCCA clusters: Cluster_13

No alias

Target	Alias	Description	ECC score	Gene Family Method
At1g07070	No alias	60S ribosomal protein L35a-1...	0.03	Orthogroups_2024-Update
Bradi1g46840	No alias	Ribosomal protein L35Ae family protein	0.02	Orthogroups_2024-Update
Bradi3g60180	No alias	Ribosomal protein L35Ae family protein	0.02	Orthogroups_2024-Update
Brara.B02119.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.17	Orthogroups_2024-Update
Brara.D00376.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.14	Orthogroups_2024-Update
Brara.G02281.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.08	Orthogroups_2024-Update
Brara.G03191.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.22	Orthogroups_2024-Update
Brara.I03824.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Cre10.g459250	No alias	Ribosomal protein L35Ae family protein	0.17	Orthogroups_2024-Update
GRMZM2G181336	No alias	Ribosomal protein L35Ae family protein	0.03	Orthogroups_2024-Update
GRMZM5G890561	No alias	Ribosomal protein L35Ae family protein	0.04	Orthogroups_2024-Update
Glyma.05G132500	No alias	Ribosomal protein L35Ae family protein	0.13	Orthogroups_2024-Update
Glyma.08G087000	No alias	Ribosomal protein L35Ae family protein	0.15	Orthogroups_2024-Update
Glyma.14G062900	No alias	Ribosomal protein L35Ae family protein	0.11	Orthogroups_2024-Update
HORVU6Hr1G083120.2	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.05	Orthogroups_2024-Update
HORVU7Hr1G031850.4	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.07	Orthogroups_2024-Update
Kfl00148_0220	kfl00148_0220_v1.1	(at3g55750 : 81.6) Ribosomal protein L35Ae family...	0.06	Orthogroups_2024-Update
LOC_Os02g54470	No alias	60S ribosomal protein L35a-3, putative, expressed	0.04	Orthogroups_2024-Update
MA_79041g0010	No alias	(at1g74270 : 149.0) Ribosomal protein L35Ae family...	0.04	Orthogroups_2024-Update
Mp1g11470.1	No alias	component RPL35a of LSU proteome component	0.08	Orthogroups_2024-Update
PSME_00007301-RA	No alias	(at1g74270 : 157.0) Ribosomal protein L35Ae family...	0.06	Orthogroups_2024-Update
PSME_00044476-RA	teome	0.08	Orthogroups_2024-Update
(at1g74270 : 189.0) Ribosomal protein L35Ae family...	0.03	Orthogroups_2024-Update
Potri.008G059400	No alias	Ribosomal protein L35Ae family protein	0.05	Orthogroups_2024-Update
Potri.010G194200	No alias	Ribosomal protein L35Ae family protein	0.08	Orthogroups_2024-Update
Seita.1G344200.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.03	Orthogroups_2024-Update
Seita.4G043000.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.1	Orthogroups_2024-Update
Sobic.002G179300.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.12	Orthogroups_2024-Update
Sobic.004G322200.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.06	Orthogroups_2024-Update
Sobic.010G070500.1	No alias	component *(eL33) of large ribosomal-subunit (LSU) proteome	0.15	Orthogroups_2024-Update
Solyc03g096360	No alias	60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO)	0.15	Orthogroups_2024-Update
Solyc05g052800	No alias	60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO)	0.04	Orthogroups_2024-Update
Solyc05g052810	No alias	60S ribosomal protein L35a (AHRD V3.3 *** B6VC50_VERFO)	0.14	Orthogroups_2024-Update
Sopen03g026480	No alias	Ribosomal protein L35Ae	0.21	Orthogroups_2024-Update
Sopen05g031320	No alias	Ribosomal protein L35Ae	0.06	Orthogroups_2024-Update
evm.model.contig_2130.2	No alias	(at1g74270 : 120.0) Ribosomal protein L35Ae family...	0.18	Orthogroups_2024-Update
evm.model.tig00020723.23	No alias	(at3g55750 : 148.0) Ribosomal protein L35Ae family...	0.1	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	InterProScan predictions
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular	IEA	InterProScan predictions
CC	GO:0005840	ribosome	IEA	InterProScan predictions
BP	GO:0006412	translation	IEA	InterProScan predictions
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004857	enzyme inhibitor activity	IEP	Predicted GO
MF	GO:0004864	protein phosphatase inhibitor activity	IEP	Predicted GO
MF	GO:0008097	5S rRNA binding	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009538	photosystem I reaction center	IEP	Predicted GO
BP	GO:0009966	regulation of signal transduction	IEP	Predicted GO
BP	GO:0010646	regulation of cell communication	IEP	Predicted GO
BP	GO:0010921	regulation of phosphatase activity	IEP	Predicted GO
CC	GO:0015934	large ribosomal subunit	IEP	Predicted GO
MF	GO:0019208	phosphatase regulator activity	IEP	Predicted GO
MF	GO:0019212	phosphatase inhibitor activity	IEP	Predicted GO
BP	GO:0019220	regulation of phosphate metabolic process	IEP	Predicted GO
MF	GO:0019843	rRNA binding	IEP	Predicted GO
MF	GO:0019888	protein phosphatase regulator activity	IEP	Predicted GO
BP	GO:0023051	regulation of signaling	IEP	Predicted GO
BP	GO:0031399	regulation of protein modification process	IEP	Predicted GO
BP	GO:0032268	regulation of cellular protein metabolic process	IEP	Predicted GO
BP	GO:0035303	regulation of dephosphorylation	IEP	Predicted GO
BP	GO:0035304	regulation of protein dephosphorylation	IEP	Predicted GO
BP	GO:0043666	regulation of phosphoprotein phosphatase activity	IEP	Predicted GO
CC	GO:0044391	ribosomal subunit	IEP	Predicted GO
BP	GO:0048583	regulation of response to stimulus	IEP	Predicted GO
BP	GO:0050790	regulation of catalytic activity	IEP	Predicted GO
BP	GO:0051174	regulation of phosphorus metabolic process	IEP	Predicted GO
BP	GO:0051246	regulation of protein metabolic process	IEP	Predicted GO
BP	GO:0051336	regulation of hydrolase activity	IEP	Predicted GO
BP	GO:0065009	regulation of molecular function	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001780	Ribosomal_L35A	11	105

External Links

No external refs found!

Pp1s61_123V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation