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  5. Solyc12g010330

Solyc12g010330


Description : Two-component response regulator (AHRD V3.3 *** W9RL08_9ROSA)


Gene families : OG_42_0000401 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000401_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g010330
Cluster HCCA clusters: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
At1g67710 No alias Two-component response regulator... 0.03 Orthogroups_2024-Update
GRMZM2G100318 No alias response regulator 11 0.04 Orthogroups_2024-Update
PSME_00029565-RA No alias (at4g16110 : 268.0) Encodes a pollen-specific... 0.02 Orthogroups_2024-Update
PSME_00042737-RA No alias (at4g16110 : 334.0) Encodes a pollen-specific... 0.02 Orthogroups_2024-Update
Pp1s31_291V6 No alias type-b response regulator 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 211 260
IPR001789 Sig_transdc_resp-reg_receiver 26 134
No external refs found!