1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s65_6V6

Pp1s65_6V6


Description : chloroplast omega-3 fatty acid desaturase


Gene families : OG_42_0001432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001432_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s65_6V6
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
103593 No alias fatty acid desaturase 7 0.02 Orthogroups_2024-Update
At3g11170 No alias sn-2 acyl-lipid omega-3 desaturase (ferredoxin),... 0.02 Orthogroups_2024-Update
Bradi4g45037 No alias fatty acid desaturase 8 0.03 Orthogroups_2024-Update
Brara.C03356.1 No alias delta-12/delta-15 fatty acid desaturase 0.02 Orthogroups_2024-Update
Brara.E02955.1 No alias delta-12/delta-15 fatty acid desaturase 0.02 Orthogroups_2024-Update
Cre01.g038600 No alias fatty acid desaturase 7 0.02 Orthogroups_2024-Update
Glyma.07G151300 No alias fatty acid desaturase 8 0.02 Orthogroups_2024-Update
Glyma.18G202600 No alias fatty acid desaturase 8 0.03 Orthogroups_2024-Update
Potri.008G069600 No alias fatty acid desaturase 8 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR021863 FAS_N 55 137
IPR005804 FA_desaturase_dom 145 399
No external refs found!