Pp1s67_203V6

Description : MLD14.11; U-box domain-containing protein [Arabidopsis thaliana]

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s67_203V6
Cluster	HCCA clusters: Cluster_144

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g45380	No alias	plant U-box 25	0.02	Orthogroups_2024-Update
Brara.E03555.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
GRMZM2G071484	No alias	plant U-box 22	0.03	Orthogroups_2024-Update
Glyma.12G189000	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
HORVU2Hr1G105720.3	No alias	Unknown function	0.03	Orthogroups_2024-Update
HORVU6Hr1G089560.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
MA_684442g0010	No alias	(at3g52450 : 140.0) Encodes a cytoplasmically localized...	0.04	Orthogroups_2024-Update
MA_8030489g0010	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
PSME_00056652-RA	No alias	(at2g35930 : 195.0) Encodes a cytoplasmically localized...	0.03	Orthogroups_2024-Update
Potri.001G216300	No alias	plant U-box 24	0.03	Orthogroups_2024-Update
Potri.014G101100	No alias	plant U-box 23	0.04	Orthogroups_2024-Update
Potri.015G031000	No alias	ARM repeat superfamily protein	0.02	Orthogroups_2024-Update
Seita.4G109000.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Seita.7G104100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G101150.1	No alias	E3 ubiquitin ligase	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	25	96

External Links

No external refs found!