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  5. Pp1s68_85V6

Pp1s68_85V6


Description : dna binding


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s68_85V6
Cluster HCCA clusters: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
A4A49_38454 No alias transcription factor pif5 0.02 Orthogroups_2024-Update
At2g20180 No alias Transcription factor PIF1... 0.03 Orthogroups_2024-Update
Glyma.08G303900 No alias phytochrome interacting factor 4 0.02 Orthogroups_2024-Update
HORVU5Hr1G093310.11 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
HORVU5Hr1G102240.2 No alias bHLH-type transcription factor 0.06 Orthogroups_2024-Update
HORVU7Hr1G026560.2 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g56950 No alias phytochrome-interacting factor 4, putative, expressed 0.02 Orthogroups_2024-Update
Seita.3G055700.1 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Seita.3G384900.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Seita.9G160700.1 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Sobic.002G031000.1 No alias regulatory protein *(PIF) of red/far-red light... 0.03 Orthogroups_2024-Update
Solyc09g063010 No alias bHLH transcription factor 058 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004371 glycerone kinase activity IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0005986 sucrose biosynthetic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006071 glycerol metabolic process IEP Predicted GO
MF GO:0008883 glutamyl-tRNA reductase activity IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
MF GO:0019203 carbohydrate phosphatase activity IEP Predicted GO
BP GO:0019400 alditol metabolic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Predicted GO
MF GO:0050308 sugar-phosphatase activity IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 492 538
No external refs found!