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  5. Solyc12g011190

Solyc12g011190


Description : Plant regulator RWP-RK family protein (AHRD V3.3 *-* AT2G43500.9)


Gene families : OG_42_0000310 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g011190
Cluster HCCA clusters: Cluster_232

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G198300 No alias Function unknown 0.03 Orthogroups_2024-Update
Sobic.003G000800.1 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Predicted GO
BP GO:0006399 tRNA metabolic process IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006644 phospholipid metabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016831 carboxy-lyase activity IEP Predicted GO
BP GO:0034227 tRNA thio-modification IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 34 80
No external refs found!