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Pp1s69_18V6


Description : polyubiqutin 1


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s69_18V6
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
HORVU2Hr1G104410.26 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Potri.005G198700 No alias related to ubiquitin 1 0.02 Orthogroups_2024-Update
Potri.017G036800 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0035145 exon-exon junction complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 272 339
IPR000626 Ubiquitin_dom 180 212
IPR000626 Ubiquitin_dom 94 161
IPR000626 Ubiquitin_dom 14 72
No external refs found!