Solyc12g011370

Description : Cationic amino acid transporter, putative (AHRD V3.3 *** B9RY28_RICCO)

Gene families : OG_42_0000938 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000938_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc12g011370
Cluster	HCCA clusters: Cluster_123

Target	Alias	Description	ECC score	Gene Family Method
Glyma.08G129700	No alias	amino acid transporter 1	0.04	Orthogroups_2024-Update
Glyma.09G084700	No alias	amino acid transporter 1	0.03	Orthogroups_2024-Update
Pp1s9_272V6	No alias	cationic amino acid transporter	0.02	Orthogroups_2024-Update
Seita.4G174400.1	No alias	cationic amino acid transporter *(CAT)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0003333	amino acid transmembrane transport	IEA	InterProScan predictions
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005342	organic acid transmembrane transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006865	amino acid transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
MF	GO:0008514	organic anion transmembrane transporter activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015171	amino acid transmembrane transporter activity	IEA	InterProScan predictions
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015711	organic anion transport	None	Extended
BP	GO:0015849	organic acid transport	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0046942	carboxylic acid transport	None	Extended
MF	GO:0046943	carboxylic acid transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
BP	GO:0098656	anion transmembrane transport	None	Extended
BP	GO:1903825	organic acid transmembrane transport	None	Extended
BP	GO:1905039	carboxylic acid transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Predicted GO
MF	GO:0004568	chitinase activity	IEP	Predicted GO
MF	GO:0004620	phospholipase activity	IEP	Predicted GO
MF	GO:0004629	phospholipase C activity	IEP	Predicted GO
BP	GO:0006022	aminoglycan metabolic process	IEP	Predicted GO
BP	GO:0006026	aminoglycan catabolic process	IEP	Predicted GO
BP	GO:0006030	chitin metabolic process	IEP	Predicted GO
BP	GO:0006032	chitin catabolic process	IEP	Predicted GO
BP	GO:0006040	amino sugar metabolic process	IEP	Predicted GO
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Predicted GO
MF	GO:0008378	galactosyltransferase activity	IEP	Predicted GO
MF	GO:0016298	lipase activity	IEP	Predicted GO
MF	GO:0016597	amino acid binding	IEP	Predicted GO
BP	GO:0016998	cell wall macromolecule catabolic process	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0031406	carboxylic acid binding	IEP	Predicted GO
BP	GO:0042737	drug catabolic process	IEP	Predicted GO
MF	GO:0043177	organic acid binding	IEP	Predicted GO
BP	GO:0044036	cell wall macromolecule metabolic process	IEP	Predicted GO
BP	GO:0046348	amino sugar catabolic process	IEP	Predicted GO
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Predicted GO
BP	GO:1901071	glucosamine-containing compound metabolic process	IEP	Predicted GO
BP	GO:1901072	glucosamine-containing compound catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002293	AA/rel_permease1	74	483
IPR029485	CAT_C	512	561

External Links

No external refs found!

Solyc12g011370

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation