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  5. Pp1s6_189V6

Pp1s6_189V6


Description : chloroplast omega-3 fatty acid desaturase


Gene families : OG_42_0001432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001432_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s6_189V6
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
Brara.E02955.1 No alias delta-12/delta-15 fatty acid desaturase 0.02 Orthogroups_2024-Update
Glyma.18G062000 No alias fatty acid desaturase 8 0.02 Orthogroups_2024-Update
Sobic.005G002700.1 No alias delta-12/delta-15 fatty acid desaturase 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA InterProScan predictions
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
CC GO:0070469 respiratory chain IEP Predicted GO
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 112 363
IPR021863 FAS_N 49 100
No external refs found!