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  5. Pp1s6_39V6

Pp1s6_39V6


Description : chloroplast nucleoid dna binding protein


Gene families : OG_42_0000019 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s6_39V6
Cluster HCCA clusters: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
413603 No alias Eukaryotic aspartyl protease family protein 0.01 Orthogroups_2024-Update
54030 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
64135 No alias Eukaryotic aspartyl protease family protein 0.06 Orthogroups_2024-Update
64201 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
83230 No alias Eukaryotic aspartyl protease family protein 0.03 Orthogroups_2024-Update
96804 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
A4A49_08791 No alias aspartic proteinase-like protein 2 0.03 Orthogroups_2024-Update
A4A49_24178 No alias aspartyl protease family protein 2 0.03 Orthogroups_2024-Update
A4A49_36899 No alias aspartic proteinase-like protein 2 0.02 Orthogroups_2024-Update
At1g01300 No alias Aspartyl protease family protein 2... 0.02 Orthogroups_2024-Update
At1g31450 No alias Aspartyl protease family protein... 0.02 Orthogroups_2024-Update
At1g65240 No alias Aspartic proteinase-like protein 2... 0.03 Orthogroups_2024-Update
At2g28010 No alias Eukaryotic aspartyl protease family protein... 0.02 Orthogroups_2024-Update
Bradi2g02660 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Bradi3g53620 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Brara.F03387.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Brara.G03687.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Brara.I05318.1 No alias A1-class (Pepsin) protease 0.03 Orthogroups_2024-Update
Brara.J00055.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Glyma.07G021200 No alias Eukaryotic aspartyl protease family protein 0.04 Orthogroups_2024-Update
Glyma.08G166100 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Glyma.08G220600 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Glyma.09G187200 No alias Eukaryotic aspartyl protease family protein 0.04 Orthogroups_2024-Update
Glyma.09G249300 No alias Eukaryotic aspartyl protease family protein 0.04 Orthogroups_2024-Update
Glyma.11G190800 No alias Eukaryotic aspartyl protease family protein 0.05 Orthogroups_2024-Update
Glyma.12G179800 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Glyma.15G260600 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Glyma.19G256400 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G019770.2 No alias A1-class (Pepsin) protease 0.02 Orthogroups_2024-Update
HORVU7Hr1G109730.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
LOC_Os01g04710 No alias aspartic proteinase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g56930 No alias eukaryotic aspartyl protease domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g48870 No alias aspartic proteinase nepenthesin-2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g09530 No alias expressed protein 0.02 Orthogroups_2024-Update
MA_10293g0010 No alias (at3g25700 : 411.0) Eukaryotic aspartyl protease family... 0.03 Orthogroups_2024-Update
MA_10433056g0010 No alias (at1g25510 : 213.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
MA_15755g0020 No alias (at2g03200 : 316.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
MA_15755g0030 No alias (at2g03200 : 348.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
MA_24673g0010 No alias (at5g22850 : 497.0) Eukaryotic aspartyl protease family... 0.03 Orthogroups_2024-Update
MA_333359g0010 No alias (at5g10770 : 268.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
MA_51087g0010 No alias (at3g25700 : 232.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
MA_52634g0010 No alias (at3g25700 : 186.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
Mp2g26790.1 No alias pepsin-type protease 0.02 Orthogroups_2024-Update
Mp5g12090.1 No alias pepsin-type protease 0.02 Orthogroups_2024-Update
Mp5g16350.1 No alias pepsin-type protease 0.02 Orthogroups_2024-Update
Mp5g16430.1 No alias pepsin-type protease 0.02 Orthogroups_2024-Update
Mp6g05980.1 No alias pepsin-type protease 0.02 Orthogroups_2024-Update
PSME_00005638-RA No alias (at3g25700 : 412.0) Eukaryotic aspartyl protease family... 0.01 Orthogroups_2024-Update
PSME_00006954-RA No alias (at3g20015 : 405.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00011287-RA No alias (at5g22850 : 247.0) Eukaryotic aspartyl protease family... 0.01 Orthogroups_2024-Update
PSME_00019048-RA No alias (at2g35615 : 119.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00019445-RA No alias (at3g20015 : 220.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00026773-RA No alias (at2g03200 : 309.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00030335-RA No alias (at2g03200 : 258.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00039990-RA No alias (at2g03200 : 216.0) Eukaryotic aspartyl protease family... 0.02 Orthogroups_2024-Update
PSME_00048209-RA No alias (gnl|cdd|38754 : 99.8) no description available &... 0.02 Orthogroups_2024-Update
Potri.001G041700 No alias Eukaryotic aspartyl protease family protein 0.05 Orthogroups_2024-Update
Potri.008G115900 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Potri.018G015100 No alias Eukaryotic aspartyl protease family protein 0.02 Orthogroups_2024-Update
Pp1s174_13V6 No alias aspartic proteinase nepenthesin-1 0.02 Orthogroups_2024-Update
Pp1s425_21V6 No alias aspartic proteinase nepenthesin-1 0.02 Orthogroups_2024-Update
Seita.2G249200.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.02 Orthogroups_2024-Update
Seita.5G214300.1 No alias A1-class (Pepsin) protease & EC_3.4 hydrolase acting on... 0.01 Orthogroups_2024-Update
Solyc03g117690 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.07 Orthogroups_2024-Update
Solyc03g119690 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc04g008850 No alias Eukaryotic aspartyl protease family protein (AHRD V3.3... 0.04 Orthogroups_2024-Update
Sopen03g036610 No alias Xylanase inhibitor N-terminal 0.02 Orthogroups_2024-Update
Sopen05g005690 No alias Xylanase inhibitor N-terminal 0.02 Orthogroups_2024-Update
Sopen10g005190 No alias Xylanase inhibitor N-terminal 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0004356 glutamate-ammonia ligase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006541 glutamine metabolic process IEP Predicted GO
BP GO:0006542 glutamine biosynthetic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016211 ammonia ligase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR032861 TAXi_N 128 295
IPR032799 TAXi_C 317 467
No external refs found!