Solyc12g013640

Description : ABC transporter G family member (AHRD V3.3 *** A0A0K9Q0M2_ZOSMR)

Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc12g013640
Cluster	HCCA clusters: Cluster_305

Target	Alias	Description	ECC score	Gene Family Method
Bradi1g36410	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Bradi1g74640	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Brara.A03279.1	No alias	sporopollenin precursor exporter *(ABCG26) & subfamily...	0.03	Orthogroups_2024-Update
Cre17.g743547	No alias	ABC-2 type transporter family protein	0.01	Orthogroups_2024-Update
Potri.011G123200	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Solyc07g065780	No alias	ABC transporter G family member (AHRD V3.3 *** A0A0K9NM22_ZOSMR)	0.03	Orthogroups_2024-Update
evm.model.tig00020614.26	No alias	(at4g27420 : 244.0) ABC-2 type transporter family...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005783	endoplasmic reticulum	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
CC	GO:0034357	photosynthetic membrane	IEP	Predicted GO
CC	GO:0042651	thylakoid membrane	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	366	570
IPR003439	ABC_transporter-like	63	214

External Links

No external refs found!