Pp1s70_39V6


Description : transparent testa 12


Gene families : OG_42_0000106 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000106_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s70_39V6
Cluster HCCA clusters: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
At5g52450 No alias Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3] 0.02 Orthogroups_2024-Update
Bradi2g46750 No alias MATE efflux family protein 0.03 Orthogroups_2024-Update
Bradi5g07146 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
Glyma.08G050700 No alias MATE efflux family protein 0.06 Orthogroups_2024-Update
Glyma.13G275600 No alias MATE efflux family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G039670.2 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
HORVU6Hr1G084080.3 No alias metabolite transporter *(DTX) 0.03 Orthogroups_2024-Update
Kfl00471_0030 kfl00471_0030_v1.... (at4g23030 : 251.0) MATE efflux family protein;... 0.02 Orthogroups_2024-Update
Kfl00481_0100 kfl00481_0100_v1.... (at2g04050 : 280.0) MATE efflux family protein;... 0.03 Orthogroups_2024-Update
Potri.012G051900 No alias MATE efflux family protein 0.04 Orthogroups_2024-Update
Pp1s183_67V6 No alias transparent testa 12 0.02 Orthogroups_2024-Update
Sobic.002G311200.1 No alias metabolite transporter *(DTX) 0.02 Orthogroups_2024-Update
Solyc02g091070 No alias Protein DETOXIFICATION (AHRD V3.3 *** K4BCQ6_SOLLC) 0.03 Orthogroups_2024-Update
Sopen03g031350 No alias MatE 0.02 Orthogroups_2024-Update
Sopen07g002830 No alias MatE 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006855 drug transmembrane transport IEA InterProScan predictions
MF GO:0015238 drug transmembrane transporter activity IEA InterProScan predictions
MF GO:0015297 antiporter activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0016603 glutaminyl-peptide cyclotransferase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Predicted GO
BP GO:0017186 peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase IEP Predicted GO
BP GO:0018199 peptidyl-glutamine modification IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002528 MATE_fam 295 457
IPR002528 MATE_fam 74 234
No external refs found!