1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g013680

Solyc12g013680


Description : Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** AT3G24240.1)


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g013680
Cluster HCCA clusters: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
A4A49_08665 No alias receptor-like protein 12 0.04 Orthogroups_2024-Update
At1g45616 No alias Receptor-like protein 6 [Source:UniProtKB/Swiss-Prot;Acc:Q9C637] 0.05 Orthogroups_2024-Update
Bradi2g02160 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
Bradi2g03853 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
Bradi2g03886 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
Bradi2g03920 No alias receptor like protein 23 0.03 Orthogroups_2024-Update
Brara.D00691.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G174128 No alias receptor like protein 7 0.04 Orthogroups_2024-Update
Glyma.14G043300 No alias receptor like protein 33 0.03 Orthogroups_2024-Update
LOC_Os01g06720 No alias disease resistance protein SlVe2 precursor, putative, expressed 0.02 Orthogroups_2024-Update
Potri.011G054500 No alias receptor like protein 6 0.02 Orthogroups_2024-Update
Potri.012G026000 No alias receptor like protein 12 0.02 Orthogroups_2024-Update
Potri.012G027400 No alias receptor like protein 35 0.03 Orthogroups_2024-Update
Potri.012G028500 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
Seita.2G052500.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.2G052800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.2G052900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.5G114100.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G058001.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G059300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.007G033100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g014160 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g076490 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g009520 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Solyc12g040740 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Solyc12g099980 No alias Leucine-rich repeat receptor-like protein kinase family... 0.04 Orthogroups_2024-Update
Sopen01g002540 No alias Leucine rich repeat 0.03 Orthogroups_2024-Update
Sopen05g007250 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update
Sopen12g034500 No alias Leucine Rich repeats (2 copies) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006470 protein dephosphorylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 240 257
IPR001611 Leu-rich_rpt 391 445
IPR001611 Leu-rich_rpt 291 349
IPR001611 Leu-rich_rpt 553 611
IPR001611 Leu-rich_rpt 456 517
IPR013210 LRR_N_plant-typ 9 61
No external refs found!