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  5. Pp1s71_170V6

Pp1s71_170V6


Description : 4-coumarate: ligase


Gene families : OG_42_0000133 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s71_170V6
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
171251 No alias 4-coumarate:CoA ligase 2 0.04 Orthogroups_2024-Update
A4A49_41306 No alias 4-coumarate--coa ligase 2 0.03 Orthogroups_2024-Update
At1g20510 No alias 4-coumarate--CoA ligase-like 5... 0.02 Orthogroups_2024-Update
At1g65060 No alias 4-coumarate--CoA ligase 3... 0.04 Orthogroups_2024-Update
Bradi3g52350 No alias 4-coumarate:CoA ligase 3 0.02 Orthogroups_2024-Update
Bradi5g04760 No alias acyl-CoA synthetase 5 0.04 Orthogroups_2024-Update
Brara.C03823.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Brara.E02089.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Brara.F01460.1 No alias OPC-8 0.02 Orthogroups_2024-Update
Brara.G02592.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Brara.H02326.1 No alias OPC-8 0.03 Orthogroups_2024-Update
Glyma.05G075100 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Glyma.13G372000 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
HORVU6Hr1G030390.2 No alias p-coumarate 0.04 Orthogroups_2024-Update
LOC_Os08g14760 No alias AMP-binding domain containing protein, expressed 0.01 Orthogroups_2024-Update
MA_10432069g0020 No alias (at1g20510 : 391.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
MA_109119g0010 No alias (p31687|4cl2_soybn : 667.0) 4-coumarate--CoA ligase 2... 0.05 Orthogroups_2024-Update
MA_70509g0010 No alias (o24146|4cl2_tobac : 763.0) 4-coumarate--CoA ligase 2... 0.03 Orthogroups_2024-Update
PSME_00006219-RA No alias (at4g05160 : 449.0) Encodes a peroxisomal protein... 0.01 Orthogroups_2024-Update
PSME_00006443-RA No alias (at1g20510 : 556.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00010613-RA No alias (at1g20510 : 572.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00013809-RA No alias (at1g20510 : 678.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00015568-RA No alias (o24146|4cl2_tobac : 707.0) 4-coumarate--CoA ligase 2... 0.04 Orthogroups_2024-Update
PSME_00015569-RA No alias (o24146|4cl2_tobac : 689.0) 4-coumarate--CoA ligase 2... 0.05 Orthogroups_2024-Update
PSME_00017730-RA No alias (at1g20510 : 538.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.03 Orthogroups_2024-Update
PSME_00022177-RA No alias (o24146|4cl2_tobac : 717.0) 4-coumarate--CoA ligase 2... 0.09 Orthogroups_2024-Update
PSME_00024856-RA No alias (at1g20510 : 521.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.01 Orthogroups_2024-Update
PSME_00041965-RA No alias (at1g20510 : 583.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.02 Orthogroups_2024-Update
PSME_00042414-RA No alias (at1g20510 : 636.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.01 Orthogroups_2024-Update
PSME_00043405-RA No alias (at1g20510 : 552.0) OPC-8:0 CoA ligase1 (OPCL1);... 0.01 Orthogroups_2024-Update
Potri.017G033600 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
Potri.018G094200 No alias 4-coumarate:CoA ligase 2 0.03 Orthogroups_2024-Update
Potri.T071600 No alias 4-coumarate:CoA ligase 5 0.03 Orthogroups_2024-Update
Seita.1G065800.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Seita.1G283300.1 No alias p-coumarate 0.05 Orthogroups_2024-Update
Seita.4G191500.1 No alias p-coumarate 0.02 Orthogroups_2024-Update
Seita.6G167900.1 No alias p-coumarate 0.03 Orthogroups_2024-Update
Seita.9G184000.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.004G272700.1 No alias p-coumarate 0.04 Orthogroups_2024-Update
Solyc03g097030 No alias 4-coumarate--CoA ligase 0.02 Orthogroups_2024-Update
Solyc03g111170 No alias 4-coumarate:CoA ligase-like protein (AHRD V3.3 *** G7J515_MEDTR) 0.02 Orthogroups_2024-Update
Solyc03g117870 No alias 4-coumarate--CoA ligase 0.03 Orthogroups_2024-Update
Solyc07g008360 No alias ribosomal protein L30/L7 family protein 0.02 Orthogroups_2024-Update
Sopen03g030320 No alias AMP-binding enzyme 0.04 Orthogroups_2024-Update
Sopen03g036780 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen06g025930 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update
Sopen08g024910 No alias AMP-binding enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004097 catechol oxidase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 77 482
IPR025110 AMP-bd_C 491 566
No external refs found!