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  5. Pp1s71_283V6

Pp1s71_283V6


Description : nad-dependent epimerase dehydratase


Gene families : OG_42_0003865 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s71_283V6
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
107618 No alias chloroplast RNA binding 0.05 Orthogroups_2024-Update
At1g09340 No alias chloroplast RNA binding [Source:TAIR;Acc:AT1G09340] 0.06 Orthogroups_2024-Update
Bradi4g08030 No alias chloroplast RNA binding 0.02 Orthogroups_2024-Update
Brara.F00592.1 No alias endoribonuclease *(CSP41) 0.03 Orthogroups_2024-Update
Brara.I05274.1 No alias endoribonuclease *(CSP41) 0.03 Orthogroups_2024-Update
Glyma.03G230000 No alias chloroplast RNA binding 0.08 Orthogroups_2024-Update
Glyma.19G227700 No alias chloroplast RNA binding 0.11 Orthogroups_2024-Update
HORVU2Hr1G029230.1 No alias endoribonuclease *(CSP41) 0.04 Orthogroups_2024-Update
HORVU2Hr1G036220.1 No alias endoribonuclease *(CSP41) 0.04 Orthogroups_2024-Update
HORVU2Hr1G053340.3 No alias endoribonuclease *(CSP41) 0.03 Orthogroups_2024-Update
HORVU4Hr1G052270.4 No alias endoribonuclease *(CSP41) 0.02 Orthogroups_2024-Update
HORVU5Hr1G009200.2 No alias Unknown function 0.04 Orthogroups_2024-Update
LOC_Os12g23180 No alias 3-beta hydroxysteroid dehydrogenase/isomerase family... 0.03 Orthogroups_2024-Update
MA_196108g0010 No alias (at1g09340 : 139.0) Encodes CHLOROPLAST RNA BINDING... 0.06 Orthogroups_2024-Update
Mp1g11680.1 No alias endoribonuclease (CSP41) 0.06 Orthogroups_2024-Update
PSME_00001882-RA No alias (at1g09340 : 556.0) Encodes CHLOROPLAST RNA BINDING... 0.02 Orthogroups_2024-Update
Potri.013G006100 No alias chloroplast RNA binding 0.05 Orthogroups_2024-Update
Seita.3G304400.1 No alias endoribonuclease *(CSP41) 0.03 Orthogroups_2024-Update
Sobic.008G066100.1 No alias endoribonuclease *(CSP41) 0.03 Orthogroups_2024-Update
Solyc06g073260 No alias chloroplast RNA binding protein (AHRD V3.3 *** AT1G09340.1) 0.13 Orthogroups_2024-Update
Sopen06g029620 No alias NAD dependent epimerase/dehydratase family 0.09 Orthogroups_2024-Update
evm.model.contig_3495.2 No alias (at1g09340 : 335.0) Encodes CHLOROPLAST RNA BINDING... 0.04 Orthogroups_2024-Update
evm.model.tig00021181.14 No alias (at1g09340 : 348.0) Encodes CHLOROPLAST RNA BINDING... 0.02 Orthogroups_2024-Update
evm.model.tig00021720.14 No alias (at1g09340 : 242.0) Encodes CHLOROPLAST RNA BINDING... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0050662 coenzyme binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004392 heme oxygenase (decyclizing) activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0006788 heme oxidation IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
MF GO:0010242 oxygen evolving activity IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
BP GO:0030163 protein catabolic process IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0042168 heme metabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051188 cofactor biosynthetic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
MF GO:0098809 nitrite reductase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001509 Epimerase_deHydtase 94 311
No external refs found!