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  5. Solyc12g013770

Solyc12g013770


Description : Mannan endo-1,4-beta-mannosidase 1 (AHRD V3.3 *** MAN1_SOLLC)


Gene families : OG_42_0000309 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g013770
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
A4A49_30651 No alias mannan endo-1,4-beta-mannosidase 6 0.03 Orthogroups_2024-Update
Brara.C00006.1 No alias endo-beta-1,4-mannanase 0.03 Orthogroups_2024-Update
Glyma.03G002100 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.09G224500 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G223000 No alias Glycosyl hydrolase superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os01g47400 No alias OsMan01 - Endo-Beta-Mannanase, expressed 0.03 Orthogroups_2024-Update
LOC_Os03g61270 No alias OsMan04 - Endo-Beta-Mannanase, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g02520 No alias OsMan09 - Endo-Beta-Mannanase, expressed 0.02 Orthogroups_2024-Update
MA_955078g0010 No alias (at5g66460 : 462.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
Mp8g13360.1 No alias endo-beta-1,4-mannanase 0.03 Orthogroups_2024-Update
PSME_00009478-RA No alias (at5g01930 : 536.0) Glycosyl hydrolase superfamily... 0.04 Orthogroups_2024-Update
PSME_00045003-RA No alias (at5g66460 : 453.0) Glycosyl hydrolase superfamily... 0.03 Orthogroups_2024-Update
Potri.002G184500 No alias Glycosyl hydrolase superfamily protein 0.03 Orthogroups_2024-Update
Pp1s5_225V6 No alias hydrolyzing o-glycosyl 0.03 Orthogroups_2024-Update
Sobic.003G293800.1 No alias endo-beta-1,4-mannanase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
BP GO:0046434 organophosphate catabolic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 38 288
No external refs found!