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  5. Solyc12g013810

Solyc12g013810


Description : Thioredoxin (AHRD V3.3 *** A0A103YK44_CYNCS)


Gene families : OG_42_0000653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g013810
Cluster HCCA clusters: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G242000 No alias Thioredoxin superfamily protein 0.03 Orthogroups_2024-Update
Glyma.20G104000 No alias thioredoxin X 0.04 Orthogroups_2024-Update
LOC_Os04g44830 No alias thioredoxin, putative, expressed 0.04 Orthogroups_2024-Update
MA_474303g0010 No alias (p07591|trxm_spiol : 182.0) Thioredoxin M-type,... 0.03 Orthogroups_2024-Update
Mp4g18950.1 No alias M-type thioredoxin 0.04 Orthogroups_2024-Update
Pp1s274_79V6 No alias thioredoxin x 0.03 Orthogroups_2024-Update
Pp1s317_45V6 No alias thioredoxin m - 0.05 Orthogroups_2024-Update
Pp1s317_49V6 No alias thioredoxin m - 0.02 Orthogroups_2024-Update
Seita.3G016700.1 No alias X-type thioredoxin *(Trx-X) 0.03 Orthogroups_2024-Update
Sopen10g002880 No alias Thioredoxin 0.05 Orthogroups_2024-Update
evm.model.contig_2075.4 No alias (p23400|trxm_chlre : 102.0) Thioredoxin M-type,... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016854 racemase and epimerase activity IEP Predicted GO
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 79 177
No external refs found!