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  5. Pp1s72_212V6

Pp1s72_212V6


Description : zinc c3hc4 type family protein


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s72_212V6
Cluster HCCA clusters: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Bradi2g50940 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Brara.A01799.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
Brara.C02146.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Glyma.12G112000 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
Glyma.13G179900 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
Glyma.15G073700 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
HORVU5Hr1G011730.2 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
LOC_Os01g56070 No alias RING finger protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.011G051800 No alias RING membrane-anchor 1 0.04 Orthogroups_2024-Update
Solyc02g078320 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G19310.1) 0.03 Orthogroups_2024-Update
Solyc02g089870 No alias RING/U-box superfamily protein (AHRD V3.3 *** A0A061DGI8_THECC) 0.02 Orthogroups_2024-Update
Sopen10g004230 No alias Zinc finger, C3HC4 type (RING finger) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030151 molybdenum ion binding IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!