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Description : cpd photolyase
Gene families : OG_42_0005942 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005942_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Physcomitrella release: Pp1s72_320V6 | |
| Cluster | HCCA clusters: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 96351 | No alias | photolyase 1 | 0.02 | Orthogroups_2024-Update | |
| At1g12370 | No alias | Deoxyribodipyrimidine photo-lyase... | 0.05 | Orthogroups_2024-Update | |
| Bradi3g22580 | No alias | photolyase 1 | 0.02 | Orthogroups_2024-Update | |
| Brara.H02659.1 | No alias | class II photolyase *(PHR1) & EC_4.1 carbon-carbon lyase | 0.02 | Orthogroups_2024-Update | |
| Glyma.11G029500 | No alias | photolyase 1 | 0.04 | Orthogroups_2024-Update | |
| HORVU7Hr1G055930.10 | No alias | class II photolyase *(PHR1) & EC_4.1 carbon-carbon lyase | 0.03 | Orthogroups_2024-Update | |
| Sopen08g027900 | No alias | FAD binding domain of DNA photolyase | 0.04 | Orthogroups_2024-Update | |
| evm.model.tig00020952.44 | No alias | (at1g12370 : 260.0) encodes an amino acid sequence with... | 0.02 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000041 | transition metal ion transport | IEP | Predicted GO |
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Predicted GO |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Predicted GO |
| MF | GO:0005381 | iron ion transmembrane transporter activity | IEP | Predicted GO |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Predicted GO |
| BP | GO:0006595 | polyamine metabolic process | IEP | Predicted GO |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006597 | spermine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Predicted GO |
| BP | GO:0006826 | iron ion transport | IEP | Predicted GO |
| BP | GO:0008215 | spermine metabolic process | IEP | Predicted GO |
| BP | GO:0008216 | spermidine metabolic process | IEP | Predicted GO |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | Predicted GO |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Predicted GO |
| BP | GO:0008610 | lipid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009308 | amine metabolic process | IEP | Predicted GO |
| BP | GO:0009309 | amine biosynthetic process | IEP | Predicted GO |
| MF | GO:0010181 | FMN binding | IEP | Predicted GO |
| MF | GO:0016160 | amylase activity | IEP | Predicted GO |
| MF | GO:0016161 | beta-amylase activity | IEP | Predicted GO |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
| MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
| BP | GO:0034755 | iron ion transmembrane transport | IEP | Predicted GO |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Predicted GO |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Predicted GO |
| MF | GO:0046915 | transition metal ion transmembrane transporter activity | IEP | Predicted GO |
| MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
| MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
| MF | GO:0051082 | unfolded protein binding | IEP | Predicted GO |
| BP | GO:0097164 | ammonium ion metabolic process | IEP | Predicted GO |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006050 | DNA_photolyase_N | 208 | 368 |
| No external refs found! |