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  5. Pp1s75_138V6

Pp1s75_138V6


Description : alpha-expansin 8


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s75_138V6
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
143857 No alias expansin A4 0.02 Orthogroups_2024-Update
179212 No alias expansin A15 0.03 Orthogroups_2024-Update
A4A49_04302 No alias expansin-a10 0.02 Orthogroups_2024-Update
A4A49_38718 No alias expansin-a7 0.03 Orthogroups_2024-Update
A4A49_64370 No alias expansin-a1 0.05 Orthogroups_2024-Update
At3g15370 No alias Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2] 0.03 Orthogroups_2024-Update
At5g39260 No alias Expansin-A21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL81] 0.03 Orthogroups_2024-Update
Bradi5g04120 No alias expansin 11 0.02 Orthogroups_2024-Update
Brara.B03141.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.B03352.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.D02404.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.E00610.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Brara.E00745.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
GRMZM2G105844 No alias expansin A1 0.03 Orthogroups_2024-Update
HORVU0Hr1G032890.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G113580.5 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
LOC_Os02g16780 No alias expansin precursor, putative, expressed 0.02 Orthogroups_2024-Update
MA_10425823g0010 No alias (q852a1|expa7_orysa : 372.0) Expansin-A7 precursor... 0.04 Orthogroups_2024-Update
MA_474624g0010 No alias (q40636|expa2_orysa : 403.0) Expansin-A2 precursor... 0.04 Orthogroups_2024-Update
MA_4979g0010 No alias (q40636|expa2_orysa : 406.0) Expansin-A2 precursor... 0.05 Orthogroups_2024-Update
PSME_00006590-RA No alias (at2g40610 : 387.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00009799-RA No alias (at1g26770 : 387.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
PSME_00014026-RA No alias (at1g69530 : 221.0) Member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00018428-RA No alias (q40636|expa2_orysa : 402.0) Expansin-A2 precursor... 0.02 Orthogroups_2024-Update
PSME_00018431-RA No alias (at2g40610 : 390.0) member of Alpha-Expansin Gene... 0.04 Orthogroups_2024-Update
PSME_00029310-RA No alias (at1g26770 : 386.0) Encodes an expansin. Naming... 0.02 Orthogroups_2024-Update
PSME_00037641-RA No alias (q852a1|expa7_orysa : 440.0) Expansin-A7 precursor... 0.02 Orthogroups_2024-Update
PSME_00050247-RA No alias (at2g40610 : 400.0) member of Alpha-Expansin Gene... 0.03 Orthogroups_2024-Update
PSME_00051669-RA No alias (at2g40610 : 425.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
PSME_00055878-RA No alias (at5g02260 : 159.0) member of Alpha-Expansin Gene... 0.02 Orthogroups_2024-Update
Potri.004G123200 No alias expansin A1 0.02 Orthogroups_2024-Update
Potri.006G086100 No alias Barwin-like endoglucanases superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G108000 No alias expansin A8 0.02 Orthogroups_2024-Update
Potri.013G154700 No alias expansin A8 0.04 Orthogroups_2024-Update
Potri.017G140000 No alias expansin A13 0.02 Orthogroups_2024-Update
Potri.019G057500 No alias expansin A8 0.02 Orthogroups_2024-Update
Pp1s191_40V6 No alias alpha expansin xpa5 0.02 Orthogroups_2024-Update
Pp1s251_70V6 No alias alpha-expansin 15 0.03 Orthogroups_2024-Update
Seita.1G318000.1 No alias alpha-class expansin 0.01 Orthogroups_2024-Update
Seita.9G535700.1 No alias alpha-class expansin 0.03 Orthogroups_2024-Update
Sobic.007G166500.1 No alias alpha-class expansin 0.02 Orthogroups_2024-Update
Solyc06g049050 No alias expansin 2 0.02 Orthogroups_2024-Update
Sopen03g034870 No alias Pollen allergen 0.02 Orthogroups_2024-Update
Sopen06g032650 No alias Pollen allergen 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008061 chitin binding IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 67 155
IPR007117 Expansin_CBD 166 241
No external refs found!