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  5. Solyc12g014260

Solyc12g014260


Description : LIGHT-DEPENDENT SHORT HYPOCOTYLS-like protein (DUF640) (AHRD V3.3 *** AT2G42610.2)


Gene families : OG_42_0000294 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000294_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g014260
Cluster HCCA clusters: Cluster_196

Target Alias Description ECC score Gene Family Method Actions
Brara.F02899.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Brara.J01235.1 No alias plant-specific ALOG-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.08G078500 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
MA_12926g0010 No alias (at3g23290 : 222.0) LIGHT SENSITIVE HYPOCOTYLS 4 (LSH4);... 0.02 Orthogroups_2024-Update
Potri.001G460400 No alias Protein of unknown function (DUF640) 0.03 Orthogroups_2024-Update
Potri.009G076100 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update
Sobic.003G342600.2 No alias plant-specific ALOG-type transcription factor 0.02 Orthogroups_2024-Update
Sopen09g033090 No alias Protein of unknown function (DUF640) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
InterPro domains Description Start Stop
IPR006936 ALOG_dom 46 164
No external refs found!