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  5. Pp1s76_13V6

Pp1s76_13V6


Description : nin one binding protein


Gene families : OG_42_0005489 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005489_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s76_13V6
Cluster HCCA clusters: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Bradi3g01370 No alias Function unknown 0.04 Orthogroups_2024-Update
Brara.D01131.1 No alias pre-rRNA processing endonuclease involved in ITS1 rRNA... 0.02 Orthogroups_2024-Update
Cre01.g031750 No alias Function unknown 0.05 Orthogroups_2024-Update
LOC_Os02g02360 No alias expressed protein 0.02 Orthogroups_2024-Update
PSME_00045468-RA No alias (at5g41190 : 464.0) CONTAINS InterPro DOMAIN/s: Nin one... 0.02 Orthogroups_2024-Update
Seita.1G116900.1 No alias pre-rRNA processing endonuclease involved in ITS1 rRNA... 0.02 Orthogroups_2024-Update
Solyc08g007990 No alias RNA-binding NOB1-like protein (AHRD V3.3 *** AT5G41190.1) 0.02 Orthogroups_2024-Update
evm.model.tig00020964.11 No alias (at5g41190 : 112.0) CONTAINS InterPro DOMAIN/s: Nin one... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006520 cellular amino acid metabolic process IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
InterPro domains Description Start Stop
IPR033411 Ribonuclease_PIN 44 131
IPR014881 NOB1_Zn-bd 494 564
No external refs found!