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  5. Solyc12g014360

Solyc12g014360


Description : protein trichome birefringence-like 41


Gene families : OG_42_0000861 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000861_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g014360
Cluster HCCA clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G081700 No alias TRICHOME BIREFRINGENCE-LIKE 38 0.04 Orthogroups_2024-Update
LOC_Os01g46350 No alias proteins of unknown function domain containing protein,... 0.02 Orthogroups_2024-Update
Potri.004G055000 No alias TRICHOME BIREFRINGENCE-LIKE 38 0.03 Orthogroups_2024-Update
Potri.004G135600 No alias TRICHOME BIREFRINGENCE-LIKE 43 0.04 Orthogroups_2024-Update
Potri.011G106200 No alias TRICHOME BIREFRINGENCE-LIKE 38 0.03 Orthogroups_2024-Update
Potri.011G106300 No alias TRICHOME BIREFRINGENCE-LIKE 41 0.02 Orthogroups_2024-Update
Sopen01g030390 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 89 350
IPR025846 PMR5_N_dom 35 86
No external refs found!