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  5. Solyc12g014450

Solyc12g014450


Description : extracellular ligand-gated ion channel protein (DUF3537) (AHRD V3.3 *** AT3G20300.1)


Gene families : OG_42_0001321 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001321_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g014450
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Brara.C03781.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F00300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.14G137800 No alias Function unknown 0.03 Orthogroups_2024-Update
HORVU7Hr1G092300.5 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen07g033100 No alias Protein of unknown function (DUF3537) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
CC GO:0009512 cytochrome b6f complex IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
InterPro domains Description Start Stop
IPR021924 DUF3537 23 409
No external refs found!