1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g015680

Solyc12g015680


Description : Protein TIC 20-v, chloroplastic (AHRD V3.3 *** TI205_ARATH)


Gene families : OG_42_0004486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004486_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g015680
Cluster HCCA clusters: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
A4A49_17738 No alias protein tic 20-v, chloroplastic 0.04 Orthogroups_2024-Update
At5g55710 No alias Tic20-V [Source:UniProtKB/TrEMBL;Acc:A0A178URN8] 0.02 Orthogroups_2024-Update
Kfl00706_0030 kfl00706_0030_v1.1 (at5g55710 : 96.3) FUNCTIONS IN: molecular_function... 0.02 Orthogroups_2024-Update
Potri.004G191700 No alias Function unknown 0.03 Orthogroups_2024-Update
Potri.013G084900 No alias Uncharacterised conserved protein ycf60 0.03 Orthogroups_2024-Update
Sopen12g007600 No alias hypothetical protein 0.12 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004655 porphobilinogen synthase activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR005691 Tic20 29 192
No external refs found!