Pp1s79_25V6


Description : ap2 erf domain-containing transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s79_25V6
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Bradi2g22505 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g16450 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Bradi5g17480 No alias ethylene responsive element binding factor 1 0.03 Orthogroups_2024-Update
Bradi5g21250 No alias ethylene responsive element binding factor 4 0.02 Orthogroups_2024-Update
Glyma.03G116700 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G149200 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G262800 No alias related to AP2 11 0.03 Orthogroups_2024-Update
HORVU5Hr1G080790.1 No alias subgroup ERF-VII transcription factor & transcription... 0.03 Orthogroups_2024-Update
LOC_Os04g34970 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g36000 No alias AP2 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os10g22600 No alias ethylene-responsive transcription factor, putative, expressed 0.01 Orthogroups_2024-Update
MA_10430850g0010 No alias (at1g19210 : 114.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
MA_81979g0010 No alias (at5g21960 : 95.5) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Mp4g22280.1 No alias no hits & (original description: none) 0.06 Orthogroups_2024-Update
PSME_00056324-RA No alias (at5g11590 : 111.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.001G079600 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.001G154100 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
Sobic.009G141500.1 No alias subgroup ERF-II transcription factor *(ERF19/20) 0.04 Orthogroups_2024-Update
Solyc04g078640 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc06g066540 No alias Ethylene-responsive transcription factor TINY (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Predicted GO
MF GO:0019905 syntaxin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 55
No external refs found!