Pp1s7_102V6

Description : F9F8.6; clathrin heavy chain, putative [KO:K04646] [Arabidopsis thaliana]

Gene families : OG_42_0001928 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001928_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Physcomitrella release: Pp1s7_102V6
Cluster	HCCA clusters: Cluster_184

Target	Alias	Description	ECC score	Gene Family Method
149750	No alias	Clathrin, heavy chain	0.02	Orthogroups_2024-Update
Bradi4g26877	No alias	Clathrin, heavy chain	0.09	Orthogroups_2024-Update
Bradi4g44977	No alias	Clathrin, heavy chain	0.04	Orthogroups_2024-Update
Brara.E02956.1	No alias	heavy chain of clathrin triskelion	0.03	Orthogroups_2024-Update
Cre02.g101400	No alias	Clathrin, heavy chain	0.02	Orthogroups_2024-Update
Glyma.02G258200	No alias	Clathrin, heavy chain	0.03	Orthogroups_2024-Update
Glyma.14G058300	No alias	Clathrin, heavy chain	0.03	Orthogroups_2024-Update
Glyma.14G195400	No alias	Clathrin, heavy chain	0.04	Orthogroups_2024-Update
HORVU4Hr1G024710.12	No alias	heavy chain of clathrin triskelion	0.09	Orthogroups_2024-Update
HORVU5Hr1G048010.1	No alias	heavy chain of clathrin triskelion	0.05	Orthogroups_2024-Update
Kfl00232_0230	kfl00232_0230_v1.1	(at3g11130 : 2670.0) Clathrin, heavy chain; FUNCTIONS...	0.03	Orthogroups_2024-Update
Mp6g19660.1	No alias	heavy chain of clathrin triskelion	0.03	Orthogroups_2024-Update
PSME_00001090-RA	No alias	(at3g11130 : 1091.0) Clathrin, heavy chain; FUNCTIONS...	0.03	Orthogroups_2024-Update
Seita.7G333500.1	No alias	heavy chain of clathrin triskelion	0.05	Orthogroups_2024-Update
Seita.8G020100.1	No alias	heavy chain of clathrin triskelion	0.03	Orthogroups_2024-Update
Sobic.005G003300.1	No alias	heavy chain of clathrin triskelion	0.03	Orthogroups_2024-Update
Sobic.008G003700.1	No alias	heavy chain of clathrin triskelion	0.05	Orthogroups_2024-Update
Solyc03g096000	No alias	Clathrin heavy chain (AHRD V3.3 *** K4BJ22_SOLLC)	0.02	Orthogroups_2024-Update
Sopen03g026100	No alias	Region in Clathrin and VPS	0.03	Orthogroups_2024-Update
Sopen05g031050	No alias	Region in Clathrin and VPS	0.02	Orthogroups_2024-Update
evm.model.contig_2293.23	No alias	(at3g08530 : 1151.0) Clathrin, heavy chain; FUNCTIONS...	0.03	Orthogroups_2024-Update
evm.model.contig_3467.5	No alias	(at3g11130 : 1389.0) Clathrin, heavy chain; FUNCTIONS...	0.01	Orthogroups_2024-Update
evm.model.tig00000042.11	No alias	(at3g08530 : 1751.0) Clathrin, heavy chain; FUNCTIONS...	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005198	structural molecule activity	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	InterProScan predictions
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0015833	peptide transport	None	Extended
BP	GO:0016192	vesicle-mediated transport	IEA	InterProScan predictions
CC	GO:0030117	membrane coat	None	Extended
CC	GO:0030118	clathrin coat	None	Extended
CC	GO:0030120	vesicle coat	None	Extended
CC	GO:0030125	clathrin vesicle coat	None	Extended
CC	GO:0030130	clathrin coat of trans-Golgi network vesicle	IEA	InterProScan predictions
CC	GO:0030132	clathrin coat of coated pit	IEA	InterProScan predictions
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0042886	amide transport	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044425	membrane part	None	Extended
CC	GO:0044431	Golgi apparatus part	None	Extended
CC	GO:0044433	cytoplasmic vesicle part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044459	plasma membrane part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0098797	plasma membrane protein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
CC	GO:0000221	vacuolar proton-transporting V-type ATPase, V1 domain	IEP	Predicted GO
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
MF	GO:0004576	oligosaccharyl transferase activity	IEP	Predicted GO
MF	GO:0004826	phenylalanine-tRNA ligase activity	IEP	Predicted GO
MF	GO:0005215	transporter activity	IEP	Predicted GO
MF	GO:0005216	ion channel activity	IEP	Predicted GO
MF	GO:0005244	voltage-gated ion channel activity	IEP	Predicted GO
MF	GO:0005247	voltage-gated chloride channel activity	IEP	Predicted GO
MF	GO:0005253	anion channel activity	IEP	Predicted GO
MF	GO:0005254	chloride channel activity	IEP	Predicted GO
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006432	phenylalanyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006811	ion transport	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0006821	chloride transport	IEP	Predicted GO
BP	GO:0006826	iron ion transport	IEP	Predicted GO
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Predicted GO
BP	GO:0006904	vesicle docking involved in exocytosis	IEP	Predicted GO
MF	GO:0008233	peptidase activity	IEP	Predicted GO
MF	GO:0008308	voltage-gated anion channel activity	IEP	Predicted GO
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Predicted GO
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015108	chloride transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015267	channel activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015399	primary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015672	monovalent inorganic cation transport	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016787	hydrolase activity	IEP	Predicted GO
MF	GO:0016799	hydrolase activity, hydrolyzing N-glycosyl compounds	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
BP	GO:0022406	membrane docking	IEP	Predicted GO
MF	GO:0022803	passive transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022804	active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022832	voltage-gated channel activity	IEP	Predicted GO
MF	GO:0022836	gated channel activity	IEP	Predicted GO
MF	GO:0022838	substrate-specific channel activity	IEP	Predicted GO
MF	GO:0022839	ion gated channel activity	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Predicted GO
CC	GO:0030126	COPI vesicle coat	IEP	Predicted GO
CC	GO:0030127	COPII vesicle coat	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
CC	GO:0033180	proton-transporting V-type ATPase, V1 domain	IEP	Predicted GO
BP	GO:0034220	ion transmembrane transport	IEP	Predicted GO
BP	GO:0034755	iron ion transmembrane transport	IEP	Predicted GO
MF	GO:0036442	proton-exporting ATPase activity	IEP	Predicted GO
MF	GO:0042623	ATPase activity, coupled	IEP	Predicted GO
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Predicted GO
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Predicted GO
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Predicted GO
CC	GO:0044437	vacuolar part	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	Predicted GO
BP	GO:0048278	vesicle docking	IEP	Predicted GO
BP	GO:0051640	organelle localization	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Predicted GO
BP	GO:0098655	cation transmembrane transport	IEP	Predicted GO
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Predicted GO
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Predicted GO
BP	GO:0140029	exocytic process	IEP	Predicted GO
BP	GO:0140056	organelle localization by membrane tethering	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000547	Clathrin_H-chain/VPS_repeat	850	982
IPR000547	Clathrin_H-chain/VPS_repeat	1288	1431
IPR000547	Clathrin_H-chain/VPS_repeat	701	840
IPR000547	Clathrin_H-chain/VPS_repeat	1437	1579
IPR000547	Clathrin_H-chain/VPS_repeat	557	690
IPR000547	Clathrin_H-chain/VPS_repeat	993	1131
IPR000547	Clathrin_H-chain/VPS_repeat	1143	1281
IPR022365	Clathrin_H-chain_propeller_rpt	155	197
IPR015348	Clathrin_H-chain_linker_core	344	365

External Links

No external refs found!

Pp1s7_102V6

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation