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  5. Pp1s7_128V6

Pp1s7_128V6


Description : chromatin remodeling complex subunit


Gene families : OG_42_0000461 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000461_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s7_128V6
Cluster HCCA clusters: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G062970.6 No alias regulatory protein *(CLSY3/4) of transacting siRNA pathway 0.02 Orthogroups_2024-Update
HORVU2Hr1G034330.2 No alias component *(DRD1) of DNA methylation accessory complex 0.02 Orthogroups_2024-Update
Potri.010G183832 No alias chromatin remodeling 38 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000330 SNF2_N 417 702
IPR001650 Helicase_C 741 857
No external refs found!