1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s7_364V6

Pp1s7_364V6


Description : FCAALL.416; 60S ribosomal protein L15 (RPL15A) [KO:K02877] [Arabidopsis thaliana]


Gene families : OG_42_0002052 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002052_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s7_364V6
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
270259 No alias Ribosomal protein L23/L15e family protein 0.03 Orthogroups_2024-Update
A4A49_58101 No alias 60s ribosomal protein l15-1 0.03 Orthogroups_2024-Update
At4g16720 No alias Ribosomal protein L15 [Source:UniProtKB/TrEMBL;Acc:A0A178V5T1] 0.03 Orthogroups_2024-Update
At4g17390 No alias 60S ribosomal protein L15-2... 0.03 Orthogroups_2024-Update
Bradi1g27332 No alias Ribosomal protein L23/L15e family protein 0.08 Orthogroups_2024-Update
Bradi3g23072 No alias Ribosomal protein L23/L15e family protein 0.08 Orthogroups_2024-Update
Brara.A01864.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.08 Orthogroups_2024-Update
Brara.C04524.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.C04547.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Brara.H00875.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Brara.H00923.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Cre02.g091100 No alias Ribosomal protein L23/L15e family protein 0.07 Orthogroups_2024-Update
Glyma.05G061400 No alias Ribosomal protein L23/L15e family protein 0.1 Orthogroups_2024-Update
Glyma.11G034700 No alias Ribosomal protein L23/L15e family protein 0.06 Orthogroups_2024-Update
Glyma.17G143200 No alias Ribosomal protein L23/L15e family protein 0.14 Orthogroups_2024-Update
Kfl00064_0230 kfl00064_0230_v1.1 (at4g16720 : 296.0) Ribosomal protein L23/L15e family... 0.07 Orthogroups_2024-Update
LOC_Os03g40180 No alias 60S ribosomal protein L15, putative, expressed 0.04 Orthogroups_2024-Update
MA_19619g0010 No alias (o82528|rl15_pethy : 332.0) 60S ribosomal protein L15 -... 0.04 Orthogroups_2024-Update
Mp1g06500.1 No alias component RPL15 of LSU proteome component 0.09 Orthogroups_2024-Update
Potri.003G078700 No alias Ribosomal protein L23/L15e family protein 0.04 Orthogroups_2024-Update
Pp1s28_15V6 No alias 60S ribosomal protein L15-1 [Picea mariana] 0.04 Orthogroups_2024-Update
Pp1s68_114V6 No alias 60S ribosomal protein L15-1 [Picea mariana] 0.03 Orthogroups_2024-Update
Seita.2G046800.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Seita.2G317300.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.002G047600.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.1 Orthogroups_2024-Update
Sobic.002G304900.1 No alias component *(eL15) of large ribosomal-subunit (LSU) proteome 0.09 Orthogroups_2024-Update
Solyc04g008460 No alias SET-domain containing protein lysine methyltransferase... 0.11 Orthogroups_2024-Update
Solyc06g060400 No alias Ribosomal protein L15 (AHRD V3.3 *** K4C6M0_SOLLC) 0.12 Orthogroups_2024-Update
Sopen04g003610 No alias Ribosomal L15 0.05 Orthogroups_2024-Update
Sopen06g020540 No alias Ribosomal L15 0.05 Orthogroups_2024-Update
Sopen06g023110 No alias Ribosomal L15 0.12 Orthogroups_2024-Update
evm.model.contig_2025.57 No alias (at4g16720 : 267.0) Ribosomal protein L23/L15e family... 0.11 Orthogroups_2024-Update
evm.model.tig00000310.75 No alias (at4g16720 : 256.0) Ribosomal protein L23/L15e family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000439 Ribosomal_L15e 2 190
No external refs found!