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  5. Pp1s7_438V6

Pp1s7_438V6


Description : contains ESTs AU101976(S3620),D41253(S3620) [Oryza sativa (japonica cultivar-group)]


Gene families : OG_42_0002092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002092_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Physcomitrella release: Pp1s7_438V6
Cluster HCCA clusters: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
74865 No alias ubiquitin carrier protein 7 0.02 Orthogroups_2024-Update
LOC_Os01g62244 No alias ubiquitin-conjugating enzyme, putative, expressed 0.02 Orthogroups_2024-Update
Mp4g07670.1 No alias component Ubc13 of Ubc13-Uev1 conjugating E2 complex. E2... 0.02 Orthogroups_2024-Update
Sopen09g004500 No alias Ubiquitin-conjugating enzyme 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
CC GO:0008023 transcription elongation factor complex IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
CC GO:0070449 elongin complex IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 159
No external refs found!