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  5. Pp1s80_113V6

Pp1s80_113V6


Description : 40s ribosomal protein s3a


Gene families : OG_42_0001814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s80_113V6
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Bradi1g71200 No alias Ribosomal protein S3Ae 0.02 Orthogroups_2024-Update
Bradi1g78170 No alias Ribosomal protein S3Ae 0.03 Orthogroups_2024-Update
Bradi3g01210 No alias Ribosomal protein S3Ae 0.02 Orthogroups_2024-Update
Brara.A03750.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.E03419.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.H01188.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Cre13.g568650 No alias Ribosomal protein S3Ae 0.03 Orthogroups_2024-Update
Potri.010G083200 No alias Ribosomal protein S3Ae 0.03 Orthogroups_2024-Update
Pp1s219_50V6 No alias 40s ribosomal protein s3a 0.03 Orthogroups_2024-Update
Seita.2G378300.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Sobic.001G467300.3 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Sobic.002G364100.1 No alias component *(eS1) of small ribosomal-subunit (SSU) proteome 0.02 Orthogroups_2024-Update
Solyc03g097900 No alias 40S ribosomal protein S3a (AHRD V3.3 *** RS3A_TOBAC) 0.02 Orthogroups_2024-Update
Sopen06g028860 No alias Ribosomal S3Ae family 0.02 Orthogroups_2024-Update
evm.model.contig_2340.2 No alias (p49397|rs3a_orysa : 304.0) 40S ribosomal protein S3a... 0.02 Orthogroups_2024-Update
evm.model.tig00020710.39 No alias (at4g34670 : 313.0) Ribosomal protein S3Ae; FUNCTIONS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
BP GO:0009060 aerobic respiration IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
MF GO:0015002 heme-copper terminal oxidase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Predicted GO
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
BP GO:0045333 cellular respiration IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001593 Ribosomal_S3Ae 15 221
No external refs found!