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Pp1s81_184V6


Description : polypyrimidine tract binding


Gene families : OG_42_0002256 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002256_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s81_184V6
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Bradi2g43760 No alias polypyrimidine tract-binding protein 2 0.03 Orthogroups_2024-Update
Seita.5G229600.1 No alias RNA splicing factor *(PTB) 0.02 Orthogroups_2024-Update
Solyc02g088110 No alias Polypyrimidine tract-binding protein-like (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR021790 DUF3355 243 321
IPR000504 RRM_dom 21 72
No external refs found!