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  5. Solyc12g017280

Solyc12g017280


Description : ARM repeat superfamily protein (AHRD V3.3 *** AT1G79190.1)


Gene families : OG_42_0005980 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005980_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc12g017280
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Mp8g14840.1 No alias no hits & (original description: none) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043248 proteasome assembly IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044429 mitochondrial part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!