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  5. Pp1s84_123V6

Pp1s84_123V6


Description : protein cobra


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s84_123V6
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Bradi1g22030 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Brara.I00668.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.02 Orthogroups_2024-Update
Glyma.08G249700 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.18G272000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Potri.004G167100 No alias COBRA-like protein 1 precursor 0.02 Orthogroups_2024-Update
Potri.015G060000 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Sopen02g033910 No alias COBRA-like protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
CC GO:0005886 plasma membrane IEP Predicted GO
BP GO:0006812 cation transport IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 50 216
No external refs found!