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  5. Pp1s84_31V6

Pp1s84_31V6


Description : n-terminal domain containing expressed


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s84_31V6
Cluster HCCA clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
At1g44110 No alias CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5] 0.02 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update
Brara.E01867.1 No alias regulatory protein *(TAM) involved in metaphase to... 0.02 Orthogroups_2024-Update
Glyma.04G001100 No alias Cyclin B2;3 0.02 Orthogroups_2024-Update
Glyma.04G246600 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
Glyma.06G043900 No alias CYCLIN A3;4 0.02 Orthogroups_2024-Update
Glyma.19G127200 No alias Cyclin family protein 0.02 Orthogroups_2024-Update
Solyc01g009040 No alias cyclinB1_4 0.02 Orthogroups_2024-Update
Solyc07g066660 No alias cyclinB3_1 0.02 Orthogroups_2024-Update
Solyc10g080950 No alias cyclinB1_2 0.02 Orthogroups_2024-Update
Sopen04g036020 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 204 330
IPR004367 Cyclin_C-dom 333 455
No external refs found!