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  5. Pp1s88_138V6

Pp1s88_138V6


Description : embr-h2 protein expressed


Gene families : OG_42_0001930 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001930_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s88_138V6
Cluster HCCA clusters: Cluster_236

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G423956 No alias Protease-associated (PA) RING/U-box zinc finger family protein 0.02 Orthogroups_2024-Update
HORVU7Hr1G077790.1 No alias storage vacuole protein sorting receptor *(RMR) 0.02 Orthogroups_2024-Update
Sobic.006G032600.1 No alias storage vacuole protein sorting receptor *(RMR) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003137 PA_domain 100 162
IPR001841 Znf_RING 253 296
No external refs found!