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  5. Pp1s88_195V6

Pp1s88_195V6


Description : atpase aaa-2 domain protein


Gene families : OG_42_0000227 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s88_195V6
Cluster HCCA clusters: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
At5g15450 No alias Chaperone protein ClpB3, chloroplastic... 0.04 Orthogroups_2024-Update
Bradi3g44335 No alias CLPC homologue 1 0.02 Orthogroups_2024-Update
Bradi3g44341 No alias CLPC homologue 1 0.03 Orthogroups_2024-Update
Brara.F01646.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G360681 No alias heat shock protein 101 0.02 Orthogroups_2024-Update
Glyma.04G203300 No alias Clp ATPase 0.03 Orthogroups_2024-Update
Glyma.08G242100 No alias casein lytic proteinase B3 0.03 Orthogroups_2024-Update
LOC_Os04g32560 No alias ATP-dependent Clp protease ATP-binding subunit clpA... 0.02 Orthogroups_2024-Update
PSME_00014106-RA No alias (at5g15450 : 850.0) Encodes a chloroplast-targeted... 0.02 Orthogroups_2024-Update
Seita.7G079400.1 No alias chaperone component *(ClpC) of chloroplast Clp-type... 0.02 Orthogroups_2024-Update
Seita.9G360800.1 No alias organellar chaperone *(Clp-p/Clp-m) 0.02 Orthogroups_2024-Update
Sobic.009G201500.1 No alias cytosolic chaperone *(Hsp101) 0.02 Orthogroups_2024-Update
Solyc03g115230 No alias Solanum lycopersicum heat shock protein 0.03 Orthogroups_2024-Update
evm.model.tig00001416.4 No alias (at5g15450 : 811.0) Encodes a chloroplast-targeted... 0.02 Orthogroups_2024-Update
evm.model.tig00020996.22 No alias (at5g15450 : 496.0) Encodes a chloroplast-targeted... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
MF GO:0005381 iron ion transmembrane transporter activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006826 iron ion transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0034755 iron ion transmembrane transport IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 308 437
IPR019489 Clp_ATPase_C 826 904
IPR004176 Clp_N 193 244
IPR004176 Clp_N 117 169
IPR003959 ATPase_AAA_core 645 820
No external refs found!