Description : high mobility group family
Gene families : OG_42_0000453 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000453_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Physcomitrella release: Pp1s88_212V6 | |
Cluster | HCCA clusters: Cluster_192 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.A00281.1 | No alias | DNA bending architectural protein *(HMG-B) | 0.03 | Orthogroups_2024-Update | |
MA_10436440g0030 | No alias | (at3g51880 : 87.4) Encodes a protein belonging to the... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000123 | histone acetyltransferase complex | IEP | Predicted GO |
MF | GO:0003684 | damaged DNA binding | IEP | Predicted GO |
BP | GO:0006289 | nucleotide-excision repair | IEP | Predicted GO |
BP | GO:0006405 | RNA export from nucleus | IEP | Predicted GO |
BP | GO:0006406 | mRNA export from nucleus | IEP | Predicted GO |
BP | GO:0006473 | protein acetylation | IEP | Predicted GO |
BP | GO:0006475 | internal protein amino acid acetylation | IEP | Predicted GO |
BP | GO:0006810 | transport | IEP | Predicted GO |
BP | GO:0006913 | nucleocytoplasmic transport | IEP | Predicted GO |
CC | GO:0008541 | proteasome regulatory particle, lid subcomplex | IEP | Predicted GO |
BP | GO:0010498 | proteasomal protein catabolic process | IEP | Predicted GO |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Predicted GO |
BP | GO:0016043 | cellular component organization | IEP | Predicted GO |
BP | GO:0016569 | covalent chromatin modification | IEP | Predicted GO |
BP | GO:0016570 | histone modification | IEP | Predicted GO |
BP | GO:0016573 | histone acetylation | IEP | Predicted GO |
BP | GO:0018205 | peptidyl-lysine modification | IEP | Predicted GO |
BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | Predicted GO |
BP | GO:0018394 | peptidyl-lysine acetylation | IEP | Predicted GO |
BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
CC | GO:0031248 | protein acetyltransferase complex | IEP | Predicted GO |
BP | GO:0043161 | proteasome-mediated ubiquitin-dependent protein catabolic process | IEP | Predicted GO |
BP | GO:0043248 | proteasome assembly | IEP | Predicted GO |
BP | GO:0043543 | protein acylation | IEP | Predicted GO |
BP | GO:0046907 | intracellular transport | IEP | Predicted GO |
BP | GO:0050657 | nucleic acid transport | IEP | Predicted GO |
BP | GO:0050658 | RNA transport | IEP | Predicted GO |
BP | GO:0051028 | mRNA transport | IEP | Predicted GO |
BP | GO:0051168 | nuclear export | IEP | Predicted GO |
BP | GO:0051169 | nuclear transport | IEP | Predicted GO |
BP | GO:0051179 | localization | IEP | Predicted GO |
BP | GO:0051234 | establishment of localization | IEP | Predicted GO |
BP | GO:0051236 | establishment of RNA localization | IEP | Predicted GO |
BP | GO:0051641 | cellular localization | IEP | Predicted GO |
BP | GO:0051649 | establishment of localization in cell | IEP | Predicted GO |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
CC | GO:1902493 | acetyltransferase complex | IEP | Predicted GO |
CC | GO:1990234 | transferase complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR009071 | HMG_box_dom | 57 | 126 |
No external refs found! |