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  5. Pp1s89_108V6

Pp1s89_108V6


Description : dna binding


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s89_108V6
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
A4A49_04556 No alias transcription factor myb1r1 0.03 Orthogroups_2024-Update
Brara.A01814.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.C00358.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Glyma.07G074500 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G146300 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G093800 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.14G191700 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os01g09280 No alias myb-related transcription activator, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g04840 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_40234g0010 No alias (at5g47390 : 218.0) myb-like transcription factor family... 0.02 Orthogroups_2024-Update
PSME_00007560-RA No alias (at5g47390 : 207.0) myb-like transcription factor family... 0.03 Orthogroups_2024-Update
Potri.001G248800 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G076200 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.9G319600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Sobic.003G076600.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.04 Orthogroups_2024-Update
Sobic.003G211200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Sobic.009G072200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 93 137
No external refs found!