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  5. Pp1s89_224V6

Pp1s89_224V6


Description : deah (asp-glu-ala-his) box polypeptide 8


Gene families : OG_42_0000210 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s89_224V6
Cluster HCCA clusters: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
A4A49_00699 No alias pre-mrna-splicing factor atp-dependent rna helicase deah7 0.03 Orthogroups_2024-Update
Bradi1g61220 No alias RNA helicase family protein 0.01 Orthogroups_2024-Update
Brara.B00468.1 No alias RNA helicase *(Prp16) 0.02 Orthogroups_2024-Update
Glyma.02G010500 No alias RNA helicase family protein 0.01 Orthogroups_2024-Update
Glyma.03G024000 No alias RNA helicase family protein 0.02 Orthogroups_2024-Update
Kfl00020_0480 kfl00020_0480_v1.1 (at3g26560 : 1414.0) ATP-dependent RNA helicase,... 0.01 Orthogroups_2024-Update
PSME_00004225-RA No alias (at3g62310 : 1190.0) RNA helicase family protein;... 0.01 Orthogroups_2024-Update
Potri.010G057200 No alias RNA helicase family protein 0.03 Orthogroups_2024-Update
Potri.012G034200 No alias ATP-dependent RNA helicase, putative 0.01 Orthogroups_2024-Update
Potri.014G117900 No alias RNA helicase family protein 0.01 Orthogroups_2024-Update
Sobic.009G254100.1 No alias RNA helicase *(Prp22) 0.01 Orthogroups_2024-Update
Solyc10g076910 No alias ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9SMB4_RICCO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005049 nuclear export signal receptor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
MF GO:0140142 nucleocytoplasmic carrier activity IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001650 Helicase_C 317 445
IPR011709 DUF1605 685 761
IPR007502 Helicase-assoc_dom 508 597
No external refs found!