1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp1s89_89V6

Pp1s89_89V6


Description : atp-binding cassette


Gene families : OG_42_0000390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s89_89V6
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
230259 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
GRMZM5G870629 No alias white-brown complex homolog protein 11 0.03 Orthogroups_2024-Update
Kfl00574_0100 kfl00574_0100_v1.1 (at1g17840 : 520.0) Encodes a plasma membrane-localized... 0.02 Orthogroups_2024-Update
PSME_00005988-RA No alias (at1g17840 : 836.0) Encodes a plasma membrane-localized... 0.03 Orthogroups_2024-Update
Solyc06g072100 No alias ABC transporter G family member (AHRD V3.3 *** A0A0K9NYG1_ZOSMR) 0.04 Orthogroups_2024-Update
evm.model.tig00000254.79 No alias (at1g17840 : 339.0) Encodes a plasma membrane-localized... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
MF GO:0016421 CoA carboxylase activity IEP Predicted GO
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Predicted GO
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 55 199
IPR013525 ABC_2_trans 378 588
No external refs found!