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  5. Pp1s8_278V6

Pp1s8_278V6


Description : coatomer delta subunit (delta-coat protein) (delta-cop)


Gene families : OG_42_0002671 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s8_278V6
Cluster HCCA clusters: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
A4A49_27390 No alias coatomer subunit delta 0.02 Orthogroups_2024-Update
Bradi3g34620 No alias clathrin adaptor complexes medium subunit family protein 0.04 Orthogroups_2024-Update
Cre02.g089100 No alias clathrin adaptor complexes medium subunit family protein 0.01 Orthogroups_2024-Update
Glyma.20G111200 No alias clathrin adaptor complexes medium subunit family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G062650.1 No alias subunit delta of cargo adaptor F-subcomplex 0.02 Orthogroups_2024-Update
Seita.7G275100.1 No alias subunit delta of cargo adaptor F-subcomplex 0.03 Orthogroups_2024-Update
Sopen01g045840 No alias Adaptor complexes medium subunit family 0.02 Orthogroups_2024-Update
Sopen10g011180 No alias Adaptor complexes medium subunit family 0.02 Orthogroups_2024-Update
evm.model.contig_3535.1 No alias (p49661|copd_orysa : 185.0) Coatomer subunit delta... 0.02 Orthogroups_2024-Update
evm.model.tig00020610.20 No alias (p49661|copd_orysa : 166.0) Coatomer subunit delta... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
InterPro domains Description Start Stop
IPR028565 MHD 282 503
No external refs found!