Description : F12A21.12; pectate lyase family protein [Arabidopsis thaliana]
Gene families : OG_42_0000086 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000086_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Physcomitrella release: Pp1s92_84V6 | |
Cluster | HCCA clusters: Cluster_4 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_16129 | No alias | putative pectate lyase 18 | 0.03 | Orthogroups_2024-Update | |
A4A49_24630 | No alias | putative pectate lyase 3 | 0.02 | Orthogroups_2024-Update | |
At1g14420 | No alias | Probable pectate lyase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9S2] | 0.03 | Orthogroups_2024-Update | |
Brara.G02558.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.02 | Orthogroups_2024-Update | |
Glyma.17G011200 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
MA_101171g0010 | No alias | (at1g67750 : 487.0) Pectate lyase family protein;... | 0.02 | Orthogroups_2024-Update | |
MA_10205415g0010 | No alias | (at5g63180 : 429.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
MA_10426822g0020 | No alias | (at1g67750 : 481.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
MA_203992g0010 | No alias | (at4g24780 : 544.0) Pectin lyase-like superfamily... | 0.04 | Orthogroups_2024-Update | |
MA_91467g0020 | No alias | (at4g24780 : 289.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
MA_97947g0010 | No alias | (at1g67750 : 510.0) Pectate lyase family protein;... | 0.03 | Orthogroups_2024-Update | |
Mp8g00770.1 | No alias | pectate lyase | 0.03 | Orthogroups_2024-Update | |
PSME_00000524-RA | No alias | (at4g24780 : 590.0) Pectin lyase-like superfamily... | 0.07 | Orthogroups_2024-Update | |
PSME_00005709-RA | No alias | (at3g07010 : 494.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
PSME_00009672-RA | No alias | (at5g48900 : 608.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
PSME_00019558-RA | No alias | (at4g13710 : 625.0) Pectin lyase-like superfamily... | 0.04 | Orthogroups_2024-Update | |
PSME_00019559-RA | No alias | (at4g13710 : 600.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
PSME_00019824-RA | No alias | (at1g67750 : 587.0) Pectate lyase family protein;... | 0.02 | Orthogroups_2024-Update | |
PSME_00020782-RA | No alias | (at5g63180 : 492.0) Pectin lyase-like superfamily... | 0.02 | Orthogroups_2024-Update | |
PSME_00029400-RA | No alias | (at5g63180 : 504.0) Pectin lyase-like superfamily... | 0.08 | Orthogroups_2024-Update | |
PSME_00041064-RA | No alias | (at1g67750 : 595.0) Pectate lyase family protein;... | 0.04 | Orthogroups_2024-Update | |
Potri.003G175900 | No alias | Pectin lyase-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
Potri.008G182200 | No alias | Pectate lyase family protein | 0.03 | Orthogroups_2024-Update | |
Potri.015G087800 | No alias | Pectin lyase-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Pp1s173_162V6 | No alias | pectate lyase | 0.04 | Orthogroups_2024-Update | |
Sobic.006G014400.1 | No alias | pectate lyase & EC_4.2 carbon-oxygen lyase | 0.03 | Orthogroups_2024-Update | |
Solyc09g061890 | No alias | Pectate lyase (AHRD V3.3 *** M1BAL5_SOLTU) | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003954 | NADH dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
BP | GO:0005975 | carbohydrate metabolic process | IEP | Predicted GO |
MF | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | IEP | Predicted GO |
MF | GO:0008375 | acetylglucosaminyltransferase activity | IEP | Predicted GO |
MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | Predicted GO |
MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | Predicted GO |
MF | GO:0016787 | hydrolase activity | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0030246 | carbohydrate binding | IEP | Predicted GO |
MF | GO:0050136 | NADH dehydrogenase (quinone) activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 320 | 479 |
No external refs found! |