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  5. Pp1s93_136V6

Pp1s93_136V6


Description : tubulin beta


Gene families : OG_42_0000212 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000212_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Physcomitrella release: Pp1s93_136V6
Cluster HCCA clusters: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
170592 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
183654 No alias beta-6 tubulin 0.01 Orthogroups_2024-Update
186992 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
23468 No alias tubulin beta 8 0.03 Orthogroups_2024-Update
266715 No alias beta-6 tubulin 0.03 Orthogroups_2024-Update
A4A49_15205 No alias tubulin beta-2 chain 0.03 Orthogroups_2024-Update
Bradi3g05010 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
Brara.A02439.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.B02782.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Brara.F02611.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Brara.F03751.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.05 Orthogroups_2024-Update
Brara.H01049.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Brara.K01811.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.01G109300 No alias tubulin beta chain 3 0.02 Orthogroups_2024-Update
Glyma.04G023900 No alias tubulin beta-1 chain 0.02 Orthogroups_2024-Update
Glyma.05G126100 No alias tubulin beta-7 chain 0.03 Orthogroups_2024-Update
Glyma.08G014200 No alias beta-6 tubulin 0.01 Orthogroups_2024-Update
Glyma.09G026100 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Glyma.14G219300 No alias tubulin beta-1 chain 0.02 Orthogroups_2024-Update
HORVU1Hr1G064870.3 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
HORVU6Hr1G027620.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G107100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os03g45920 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g56810 No alias tubulin/FtsZ domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_230579g0010 No alias (q41785|tbb8_maize : 276.0) Tubulin beta-8 chain (Beta-8... 0.02 Orthogroups_2024-Update
MA_230579g0020 No alias (q76fs3|tbb6_orysa : 573.0) Tubulin beta-6 chain (Beta-6... 0.02 Orthogroups_2024-Update
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Mp2g09390.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
PSME_00022639-RA No alias (q41783|tbb6_maize : 410.0) Tubulin beta-6 chain (Beta-6... 0.02 Orthogroups_2024-Update
Potri.001G464400 No alias tubulin beta chain 2 0.02 Orthogroups_2024-Update
Potri.006G095000 No alias tubulin beta 8 0.02 Orthogroups_2024-Update
Potri.009G067200 No alias beta-6 tubulin 0.02 Orthogroups_2024-Update
Pp1s22_396V6 No alias tubulin beta 0.03 Orthogroups_2024-Update
Pp1s93_158V6 No alias tubulin beta 0.02 Orthogroups_2024-Update
Seita.4G265500.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Seita.5G037100.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.04 Orthogroups_2024-Update
Seita.5G353000.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.03 Orthogroups_2024-Update
Seita.9G148700.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Seita.9G576600.1 No alias beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer 0.02 Orthogroups_2024-Update
Solyc12g089310 No alias Tubulin beta chain (AHRD V3.3 *** A0A0V0ICK0_SOLCH) 0.02 Orthogroups_2024-Update
Sopen10g031450 No alias Tubulin/FtsZ family, GTPase domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP Predicted GO
MF GO:0004019 adenylosuccinate synthase activity IEP Predicted GO
MF GO:0004427 inorganic diphosphatase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006555 methionine metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
MF GO:0008172 S-methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009086 methionine biosynthetic process IEP Predicted GO
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
CC GO:0017119 Golgi transport complex IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030126 COPI vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 347 468
IPR003008 Tubulin_FtsZ_GTPase 89 297
No external refs found!